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Establishment of a Biosensor-based High-Throughput Screening Platform for Tryptophan Overproduction

Yongfei Liu, Huiling Yuan, Dongqin Ding, Huina Dong, Qinhong Wang, Dawei Zhang

2021ACS Synthetic Biology50 citationsDOI

Abstract

With the flexibility to fold into complex structures, RNA is well-suited to act as a cellular sensor to recognize environmental fluctuations and respond to changes by regulating the corresponding genes. In this study, we established a high-throughput screening platform to screen tryptophan high-producing strains from a large repertoire of candidate strains. This platform consists of a tryptophan-specific aptamer-based biosensor and fluorescence-activated droplet sorting technology. One mutant strain, with a 165.9% increase in Trp titer compared with the parental strain, was successfully screened from a random mutagenesis library. Sequencing results revealed that a total of 10 single-nucleotide polymorphisms were discovered in the genome of the mutant strain, among which CRP(T29K) was proven to significantly increase Trp production through improving the strain’s tolerance of the harsh environment during the stationary phase of the fermentation process. Our results indicate that this strategy has great potential for improving the production of other amino acids in Escherichia coli.

Topics & Concepts

Escherichia coliCell sortingMutantTryptophanStrain (injury)MutagenesisHigh-throughput screeningBiosensorOverproductionBiologyGeneComputational biologyGeneticsAmino acidChemistryBiochemistryCellAnatomyBacterial Genetics and BiotechnologyMicrobial Metabolic Engineering and BioproductionRNA and protein synthesis mechanisms