PVDP: A portable open source pipeline for detection of plant viruses in RNAseq data. A case study on potato viruses in Antioquia (Colombia)
Pablo Andrés Gutiérrez Sánchez, Ary Rivillas, Daniel Tejada, Susana Giraldo, Andrea Restrepo-Escobar, M María Carolina Ospina, S Prieto Cadavid, Yuliana Gallo García, Mauricio Marín Montoya
Topics & Concepts
BiologyPython (programming language)Pipeline (software)Open sourceSolanum tuberosumPotato virus YHorticulturePlant virusVirologyVirusComputer scienceOperating systemSoftwarePlant Virus Research StudiesPlant Disease Resistance and GeneticsPlant and Fungal Interactions Research