Litcius/Paper detail

CellPAINT: Turnkey Illustration of Molecular Cell Biology

Adam Gardner, Ludovic Autin, Daniel Fuentes, Martina Maritan, Benjamin A. Barad, Michaela Medina, Arthur J. Olson, Danielle A. Grotjahn, David S. Goodsell

2021Frontiers in Bioinformatics27 citationsDOIOpen Access PDF

Abstract

CellPAINT is an interactive digital tool that allows non-expert users to create illustrations of the molecular structure of cells and viruses. We present a new release with several key enhancements, including the ability to generate custom ingredients from structure information in the Protein Data Bank, and interaction, grouping, and locking functions that streamline the creation of assemblies and illustration of large, complex scenes. An example of CellPAINT as a tool for hypothesis generation in the interpretation of cryoelectron tomograms is presented. CellPAINT is freely available at http://ccsb.scripps.edu/cellpaint.

Topics & Concepts

TurnkeyKey (lock)Computer scienceInterpretation (philosophy)Computational biologyBiologyProgramming languageComputer securityTelecommunicationsAdvanced Electron Microscopy Techniques and ApplicationsEnzyme Structure and FunctionCell Image Analysis Techniques