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Genome Sequence of <i>Rhizoctonia solani</i> Anastomosis Group 4 Strain Rhs4ca, a Widespread Pathomycete in Field Crops

Zhengkun Zhang, Xinyao Xia, Qian Du, Lei Xia, Xiaoyu Ma, Qiyun Li, Wende Liu

2021Molecular Plant-Microbe Interactions22 citationsDOIOpen Access PDF

Abstract

Rhizoctonia solani is an important soil-borne fungal pathogen that causes serious diseases on many agricultural crops and vegetables. Here, we report a complete genome assembly of R. solani AG4 (assembly: 45.47 Mb; contig N 50 : 1.56 Mb), using a combination of Illumina paired-end and PacBio long-read sequencing data. A total of 267 noncoding RNAs and 11,592 genes were predicted, including 109 genes associated with carbohydrate-active enzymes and 2,488 genes involved in host-pathogen interactions. The complete genome of R. solani AG4 represents a valuable base for studying interactions between host plants and pathogenic fungi and to search for potential antimicrobial targets. [Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

Topics & Concepts

Rhizoctonia solaniGenomeBiologyContigGeneGeneticsWhole genome sequencingRhizoctoniaComputational biologyMicrobiologyBotanyPlant Disease Resistance and GeneticsPlant-Microbe Interactions and ImmunityPlant Pathogens and Fungal Diseases