Genetic and biochemical diversity of terpene biosynthesis in cyanobacterial strains from tropical soda lakes
Mauricio Junior Machado, Fernanda Rios Jacinavicius, Rhuana Valdetário Médice, Rafael Barty Dextro, Anderson Miguel Teixeira Feitosa, Márcio Barczyszyn Weiss, Thierry Alexandre Pellegrinetti, Simone Raposo Cotta, Camila Manoel Crnkovic, Marli Fátima Fiore
Abstract
Introduction: Terpenes and terpenoids are vital components in diverse metabolic pathways, forming the terpenome-the complete spectrum of terpene-related compounds biosynthesized by an organism. Integrating bioinformatic tools has significantly enhanced the ability to assess metabolic potential by combining these computational approaches with experimental biochemical data. Furthermore, gene annotation provides critical insights into specialized targets, facilitating the identification of shared or unique features across different strains. Aims and methods: This study investigates the presence of terpene compounds in cyanobacterial strains isolated from tropical soda lakes using a combination of gene mining, synteny analysis, phylogenetics, and metabolomics. Results and discussion: Key enzymes, including phytoene synthase and squalene hopene cyclase, were identified, showing significant similarities and evolutionary links to gene copies in Cyanobacteria from diverse ecological environments. Metabolomic analysis complemented genomic predictions, uncovering a rich diversity of tetraterpene compounds, particularly carotenoids. Notably, triterpene hopanoids were found exclusively in a unicellular strain. These compounds show significant potential for cellular protection, metabolic adaptation, and biotechnological uses. They might support microbial communities in extreme environments, such as the saline-alkaline lakes of the Pantanal Biome in Brazil, developing unique survival and resilience strategies in these harsh conditions. Conclusion: This study highlights the extensive range of insights that can be obtained by integrating genetics and biochemistry in exploring cyanobacterial diversity, especially from organisms thriving in extreme environments.