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Global optimization of atomic structures with gradient-enhanced Gaussian process regression

Sami Kaappa, Estefanía Garijo del Río, Karsten W. Jacobsen

2021Physical review. B./Physical review. B42 citationsDOIOpen Access PDF

Abstract

Determination of atomic structures is a key challenge in the fields of computational physics and materials science, as a large variety of mechanical, chemical, electronic, and optical properties depend sensitively on structure. Here, we present a global optimization scheme where energy and force information from density functional theory (DFT) calculations is transferred to a probabilistic surrogate model to estimate both the potential energy surface (PES) and the associated uncertainties. The local minima in the surrogate PES are then used to guide the search for the global minimum in the DFT potential. We find that adding the gradients in most cases improves the efficiency of the search significantly. The method is applied to global optimization of ${[{\mathrm{Ta}}_{2}{\mathrm{O}}_{5}]}_{x}$ clusters with $x=1,2,3$, and the surface structure of oxidized ZrN.

Topics & Concepts

KrigingGaussian processRegressionProcess (computing)GaussianComputer scienceStatistical physicsStatisticsMathematicsChemistryPhysicsComputational chemistryOperating systemMachine Learning in Materials ScienceComputational Drug Discovery MethodsX-ray Diffraction in Crystallography
Global optimization of atomic structures with gradient-enhanced Gaussian process regression | Litcius