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Second coordination sphere regulates nanozyme inhibition to assist early drug discovery

Yu Wu, Li J, Wenxuan Jiang, Weiqing Xu, Lirong Zheng, Canglong Wang, Wenling Gu, Chengzhou Zhu

2025Nature Communications17 citationsDOIOpen Access PDF

Abstract

Early drug discovery is a time- and cost-consuming task requiring enzymes. Although nanozymes with metal sites akin to metallocofactors display similar activities, the lack of proximal amino acids hinders them from more adequately mimicking enzymes for drug discovery purposes. Hence, the rational design of the nanozyme second coordination sphere is desirable yet remains challenging. Herein, we report a nanozyme featuring atomically dispersed Cu-N4 sites with proximal hydroxyl groups (CuNC-OH). Experimental and theoretical results reveal that Cu-N4 site and hydroxyl respectively behave as cofactor and amino acid of the enzymatic pocket to interact with adsorbates, regulating nanozyme activity and inhibition. This mechanism involving dual sites is similar to that of thyroid peroxidases, which enables specific inhibition of CuNC-OH by antithyroid drugs. Based on these findings, a nanozyme-assisted drug discovery kit is established to analyze inhibition features of thyroid peroxidase inhibitors and screen out promising antithyroid drugs with a significant cost reduction compared with traditional enzyme kits. The rational design of the nanozyme second coordination sphere to possess more enzyme-like characteristics is desirable but remains challenging. Here, the authors report a nanozyme featuring atomically dispersed Cu-N4 sites with proximal hydroxyl groups (CuNC-OH), where they respectively behave as a cofactor and amino acid of enzymatic pocket to interact with adsorbates, regulating activity and inhibition.

Topics & Concepts

Drug discoveryDrugComputational biologyComputer scienceChemistryBiologyBioinformaticsPharmacologyAdvanced Nanomaterials in CatalysisNanocluster Synthesis and ApplicationsNanoplatforms for cancer theranostics
Second coordination sphere regulates nanozyme inhibition to assist early drug discovery | Litcius