Exploring the active core of a novel antimicrobial peptide, palustrin-2LTb, from the Kuatun frog, <i>Hylarana latouchii,</i> using a bioinformatics-directed approach
Wanchen Zou, Yingqi Zhang, Mei Zhou, Xiaoling Chen, Chengbang Ma, Tao Wang, Yangyang Jiang, Tianbao Chen, Chris Shaw, Lei Wang
Abstract
Antimicrobial peptides (AMPs), one of the most promising next-generation antibiotics to address the problem of antibiotic-resistance, have gained increasing attention in recent decades. However, some bottlenecks, such as high manufacturing costs and high toxicity, have greatly hindered their development. To overcome these problems, we developed an efficient modification approach to find the valid active-core fragments of AMPs by mimicking the cleavage process of trypsin-like specificity proteases in silico, and truncating the peptide. Herein, we used the structure of a novel AMP, palustrin-2LTb, as the template and synthesised a set of interceptive peptides using computer-aided design and prediction. Functional screening data indicated that truncated fragment 3 not only maintained and optimised antimicrobial efficacy of the parent peptide but also showed great in vivo therapeutic potential in an MRSA-infected insect larvae model. Overall, the demonstration of the therapeutic efficacy of fragment 3 showcases the efficiency of our approach for future modification of AMPs.