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Nucleic acid testing of SARS-CoV-2: A review of current methods, challenges, and prospects

Yuanshou Zhu, Meng Zhang, Zhijun Jie, Sheng‐ce Tao

2022Frontiers in Microbiology36 citationsDOIOpen Access PDF

Abstract

Coronavirus disease 2019 (COVID-19) is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and has brought a huge threat to public health and the global economy. Rapid identification and isolation of SARS-CoV-2-infected individuals are regarded as one of the most effective measures to control the pandemic. Because of its high sensitivity and specificity, nucleic acid testing has become the major method of SARS-CoV-2 detection. A deep understanding of different diagnosis methods for COVID-19 could help researchers make an optimal choice in detecting COVID-19 at different symptom stages. In this review, we summarize and evaluate the latest developments in current nucleic acid detection methods for SARS-CoV-2. In particular, we discuss biosensors and CRISPR-based diagnostic systems and their characteristics and challenges. Furthermore, the emerging COVID-19 variants and their impact on SARS-CoV-2 diagnosis are systematically introduced and discussed. Considering the disease dynamics, we also recommend optional diagnostic tests for different symptom stages. From sample preparation to results readout, we conclude by pointing out the pain points and future directions of COVID-19 detection.

Topics & Concepts

Coronavirus disease 2019 (COVID-19)Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Nucleic acid detectionPandemicCoronavirusIsolation (microbiology)Diagnostic testNucleic acidDisease2019-20 coronavirus outbreakIdentification (biology)Nucleic acid testVirologyMedicineIntensive care medicineComputational biologyBiologyComputer scienceBioinformaticsInfectious disease (medical specialty)PathologyOutbreakBotanyBiochemistryEmergency medicineSARS-CoV-2 detection and testingAdvanced biosensing and bioanalysis techniquesBiosensors and Analytical Detection
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