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The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing

Sara Parsa, Ana Ortega-Molina, Hsia‐Yuan Ying, Man Jiang, Matt Teater, Jiahui Wang, Chunying Zhao, Ed Reznik, Joyce Pasion, David Kuo, Prathibha Mohan, Shenqiu Wang, Jeannie M. Camarillo, Paul M. Thomas, Neeraj Jain, Javier García‐Bermúdez, Byoung-Kyu Cho, Wayne Tam, Neil L. Kelleher, Nicholas D. Socci, Ahmet Doǧan, Elisa de Stanchina, Giovanni Ciriello, Michael R. Green, Sheng Li, Kıvanç Birsoy, Ari Melnick, Hans‐Guido Wendel

2020Nature Cancer71 citationsDOIOpen Access PDF

Abstract

Cancer cells adapt their metabolic activities to support growth and proliferation. However, increased activity of metabolic enzymes is not usually considered an initiating event in the malignant process. Here, we investigate the possible role of the enzyme serine hydroxymethyltransferase-2 (SHMT2) in lymphoma initiation. SHMT2 localizes to the most frequent region of copy number gains at chromosome 12q14.1 in lymphoma. Elevated expression of SHMT2 cooperates with BCL2 in lymphoma development; loss or inhibition of SHMT2 impairs lymphoma cell survival. SHMT2 catalyzes the conversion of serine to glycine and produces an activated one-carbon unit that can be used to support S-adenosyl methionine synthesis. SHMT2 induces changes in DNA and histone methylation patterns leading to promoter silencing of previously uncharacterized mutational genes, such as SASH1 and PTPRM. Together, our findings reveal that amplification of SHMT2 in cooperation with BCL2 is sufficient in the initiation of lymphomagenesis through epigenetic tumor suppressor silencing. Parsa et al. report a mechanism of lymphoma initiation involving cooperation of BCL2 and increased activity of the metabolic enzyme SHMT2, which imparts changes in DNA and histone methylation.

Topics & Concepts

Serine hydroxymethyltransferaseGene silencingEpigeneticsBiologyDNA methylationCancer researchUbiquitin ligaseLymphomaGeneticsGeneSerineGene expressionUbiquitinImmunologyPhosphorylationEpigenetics and DNA MethylationCancer-related gene regulationRNA modifications and cancer