Litcius/Paper detail

“Smart Decomposition” of Cyclic Alanine-Alanine Dipeptide by VUV Radiation: A Seed for the Synthesis of Biologically Relevant Species

Darío Barreiro‐Lage, P. Bolognesi, Jacopo Chiarinelli, Robert Richter, Henning Zettergren, Mark H. Stockett, Laura Carlini, Sergio Díaz‐Tendero, L. Avaldi

2021The Journal of Physical Chemistry Letters22 citationsDOIOpen Access PDF

Abstract

A combined experimental and theoretical study shows how the interaction of VUV radiation with cyclo-(alanine-alanine), one of the 2,5-diketopiperazines (DKPs), produces reactive oxazolidinone intermediates. The theoretical simulations reveal that the interaction of these intermediates with other neutral and charged fragments, released in the molecular decomposition, leads either to the reconstruction of the cyclic dipeptide or to the formation of longer linear peptide chains. These results may explain how DKPs could have, on one hand, survived hostile chemical environments and, on the other, provided the seed for amino acid polymerization. Shedding light on the mechanisms of production of such prebiotic building blocks is of paramount importance to understanding the abiotic synthesis of relevant biologically active compounds.

Topics & Concepts

DiketopiperazinesDipeptideAlanineChemistryDecompositionAmino acidAbiotic componentStereochemistryCombinatorial chemistryOrganic chemistryBiochemistryBiologyEcologyChemical Synthesis and AnalysisProtein Structure and DynamicsRNA and protein synthesis mechanisms