Mi3-GPU: MCMC-based inverse Ising inference on GPUs for protein covariation analysis
Allan Haldane, Ronald M. Levy
Topics & Concepts
Markov chain Monte CarloIsing modelInferenceComputer scienceSampling (signal processing)AlgorithmGibbs samplingMonte Carlo methodBayesian inferenceSequence (biology)Generative modelStatistical inferenceStatistical physicsMathematicsBayesian probabilityArtificial intelligenceGenerative grammarStatisticsPhysicsComputer visionBiologyFilter (signal processing)GeneticsProtein Structure and DynamicsGene expression and cancer classificationGenomics and Chromatin Dynamics