Litcius/Paper detail

A genetic algorithm approach for predicting ribonucleic acid sequencing data classification using KNN and decision tree

Micheal Olaolu Arowolo, Marion O. Adebiyi, Ayodele A. Adebiyi

2020TELKOMNIKA (Telecommunication Computing Electronics and Control)18 citationsDOIOpen Access PDF

Abstract

Malaria larvae accept explosive variable lifecycle as they spread across numerous mosquito vector stratosphere. Transcriptomes arise in thousands of diverse parasites. Ribonucleic acid sequencing (RNA-seq) is a prevalent gene expression that has led to enhanced understanding of genetic queries. RNA seq tests transcript of gene expression, and provides methodological enhancements to machine learning procedures. Researchers have proposed several methods in evaluating and learning biological data. Genetic algorithm (GA) as a feature selection process is used in this study to fetch relevant information from the RNA-Seq Mosquito Anopheles gambiae malaria vector dataset, and evaluates the results using kth nearest neighbor (KNN) and decision tree classification algorithms. The experimental results obtained aclassification accuracy of 88.3 and 98.3 percents respectively.

Topics & Concepts

Decision treeComputer scienceDecision tree learningArtificial intelligenceData miningGenetic algorithmMachine learningTree (set theory)MathematicsMathematical analysisMachine Learning in Bioinformatics