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Estimation aboveground biomass in subtropical bamboo forests based on an interpretable machine learning framework

Xuejian Li, Huaqiang Du, Fangjie Mao, Yanxin Xu, Zihao Huang, Jie Xuan, Yongxia Zhou, Mengchen Hu

2024Environmental Modelling & Software23 citationsDOIOpen Access PDF

Abstract

Forest biomass is an essential indicator of forest ecosystem carbon cycle and global climate change research, and traditional machine learning cannot explain the mechanism of feature variable impact on forest aboveground biomass (AGB). Therefore, we proposed an interpretable bamboo forest AGB prediction method based on Shaply Additive exPlanation (SHAP) and XGBoost model to explain the impact mechanism of feature variables on AGB. The bamboo forest AGB is estimated using the monthly and annual scale leaf area index (LAI), enhanced vegetation index (EVI), ratio vegetation index (RVI), precipitation (Pre), maximum temperature (Tmax), minimum temperature (Tmin) and solar radiation (Rad) data. The results showed that the method could be effectively predict AGB, and precipitation more important than temperature. The framework revealed the threshold effect, exceeded the threshold value, the impacts of LAI_Ann, EVI_Ann, and Pre_11 on AGB were stable. The SHAP interaction value between LAI_Ann and EVI_Ann decreased with increasing EVI_Ann and LAI_Ann. By contrast, when Pre_11 increased, the SHAP interaction value between LAI_Ann and Pre_11 increased with increasing LAI_Ann. The framework could also be easily implemented, providing an interpretable machine learning model of forest AGB.

Topics & Concepts

Leaf area indexBambooBiomass (ecology)Environmental scienceVegetation (pathology)SubtropicsPrecipitationEcosystemEnhanced vegetation indexAtmospheric sciencesMathematicsVegetation IndexMeteorologyGeographyEcologyNormalized Difference Vegetation IndexPhysicsPathologyBiologyMedicineForest ecology and managementPlant Water Relations and Carbon DynamicsBamboo properties and applications