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cProSite: A Web Based Interactive Platform for Online Proteomics, Phosphoproteomics, and Genomics Data Analysis

Dunrui Wang, Xiaolan Qian, Yi‐Chieh Nancy Du, Beatriz Sánchez‐Solana

2023Journal of Biotechnology and Biomedicine42 citationsDOIOpen Access PDF

Abstract

We developed cProSite, a website that provides online genomics, proteomics, and phosphoproteomics analysis for the data of The National Cancer Institute's Clinical Proteomic Tumor Analysis Consortium (CPTAC). This tool focuses on comparisons and correlations between different proteins and mRNAs of tumors and normal tissues. Our website is designed with biologists and clinicians in mind, with a user-friendly environment and fast search engine. The search results of cProSite can be used for clinical data validation and provide useful strategic information to identify drug targets at proteomic, phosphoproteomic, or genomic levels. The site is available at http://cprosite.ccr.cancer.gov.

Topics & Concepts

PhosphoproteomicsProteomicsGenomicsComputational biologyWorld Wide WebComputer scienceData scienceBioinformaticsBiologyGenomeGeneticsProtein phosphorylationPhosphorylationProtein kinase AGeneAdvanced Proteomics Techniques and ApplicationsBioinformatics and Genomic NetworksGenetics, Bioinformatics, and Biomedical Research
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