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Construction of an HCC recurrence model based on the investigation of immune-related lncRNAs and related mechanisms

Xiang-Xu Wang, Lihong Wu, Liping Ai, Wei Pan, Jing-Yi Ren, Qiong Zhang, Hongmei Zhang

2021Molecular Therapy — Nucleic Acids13 citationsDOIOpen Access PDF

Abstract

Long noncoding RNAs (lncRNAs) are emerging as critical regulators of gene expression and play fundamental roles in immune regulation. Growing evidence suggests that immune-related genes and lncRNAs can serve as markers to predict the prognosis of patients with cancers, including hepatocellular carcinoma (HCC). This study aimed to contract an immune-related lncRNA (IR-lncRNA) signature for prospective assessment to predict early recurrence of HCC. A total of 319 HCC samples under radical resection were randomly divided into a training cohort (161 samples) and a testing cohort (158 samples). In the training dataset, univariate, lasso, and multivariate Cox regression analyses identified a 9-IR-lncRNA signature closely related to disease-free survival. Kaplan-Meier analysis, principal component analysis, gene set enrichment analysis, and nomogram were used to evaluate the risk model. The results were further confirmed in the testing cohort. Furthermore, we constructed a competitive endogenous RNA regulatory network. The results of the present study indicated that this 9-IR-lncRNA signature has important clinical implications for improving predictive outcomes and guiding individualized treatment in HCC patients. These IR-lncRNAs and regulated genes may be potential biomarkers associated with the prognosis of HCC.

Topics & Concepts

Immune systemComputational biologyMedicineComputer scienceBiologyImmunologyCancer-related molecular mechanisms researchRNA Research and SplicingMicroRNA in disease regulation
Construction of an HCC recurrence model based on the investigation of immune-related lncRNAs and related mechanisms | Litcius