Litcius/Paper detail

The Raw Cycle Threshold Values From Reverse-transcription Polymerase Chain Reaction Detection Are Not Viral Load Quantitation Units

Guillermo Aquino‐Jarquín

2020Clinical Infectious Diseases18 citationsDOI

Abstract

To theEditor—I read with great interest the recent publication by Yu and colleagues [1] regarding quantitative detection and viral load analysis of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in infected patients. The authors asserted that the results of reverse-transcription polymerase chain reaction (RT-PCR) and droplet-digital polymerase chain reaction (ddPCR) for SARS-CoV-2 detection were consistent in 95 positive samples and the cycle threshold (Ct) values of RT-PCR were highly correlated with the copy number values of ddPCR. However, the Ct values per se cannot be directly interpreted as viral load without a standard curve, which is the most direct and precise approach for analyzing quantitative data using a reference, such as in-house plasmid controls, with known viral copy numbers [2]. The linearity of the standard curve is denoted by the R2 value (Pearson correlation coefficient) and should be very close to 1. The...

Topics & Concepts

Digital polymerase chain reactionViral loadReverse transcription polymerase chain reactionReal-time polymerase chain reactionReverse transcriptasePolymerase chain reactionSevere acute respiratory syndrome coronavirus 2 (SARS-CoV-2)Molecular biologyStandard curvePolymeraseBiologyVirologyCoronavirus disease 2019 (COVID-19)VirusGeneMedicineGeneticsMessenger RNAPathologyInfectious disease (medical specialty)DiseaseBiochemistrySARS-CoV-2 detection and testingSARS-CoV-2 and COVID-19 ResearchViral gastroenteritis research and epidemiology