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Solar Bayesian Analysis Toolkit—A New Markov Chain Monte Carlo IDL Code for Bayesian Parameter Inference

Sergey A. Anfinogentov, Valery M. Nakariakov, David J. Pascoe, Christopher R. Goddard

2021The Astrophysical Journal Supplement Series43 citationsDOIOpen Access PDF

Abstract

Abstract We present the Solar Bayesian Analysis Toolkit (SoBAT), which is a new easy to use tool for Bayesian analysis of observational data, including parameter inference and model comparison. SoBAT is aimed (but not limited) to be used for the analysis of solar observational data. We describe a new IDL code designed to facilitate the comparison of a user-supplied model with data. Bayesian inference allows prior information to be taken into account. The use of Markov Chain Monte Carlo sampling allows efficient exploration of large parameter spaces and provides reliable estimation of model parameters and their uncertainties. The Bayesian evidence for different models can be used for quantitative comparison. The code is tested to demonstrate its ability to accurately recover a variety of parameter probability distributions. Its application to practical problems is demonstrated using studies of the structure and oscillation of coronal loops.

Topics & Concepts

Markov chain Monte CarloComputer scienceBayesian probabilityAlgorithmBayesian inferenceMarkov chainInferenceCode (set theory)Monte Carlo methodStatistical inferenceBayesian statisticsVariable-order Bayesian networkGibbs samplingMarkov modelFiducial inferenceSource codeImportance samplingParticle filterEstimation theoryData miningArtificial intelligenceMachine learningSampling (signal processing)MathematicsEmpirical probabilitySolar and Space Plasma DynamicsStellar, planetary, and galactic studiesIonosphere and magnetosphere dynamics
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