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Characterization of Genomic Alterations in Colorectal Liver Metastasis and Their Prognostic Value

Xuanwen Bao, Kun Wang, Ming Liu, Bin Li, Hongwei Wang, Kemin Jin, Xiaoluan Yan, Hangyu Zhang, Quan Bao, Da Xu, Lijun Wang, Wei Liu, Yanyan Wang, Juan Li, Lijuan Liu, Weijia Fang, Baocai Xing

2022Frontiers in Cell and Developmental Biology38 citationsDOIOpen Access PDF

Abstract

Colorectal liver metastases (CRLMs) are clinically heterogeneous lesions with poor prognosis. Genetic alterations play a crucial role in their progression. The traditional Fong clinical risk score (Fong-CRS) is commonly used for risk stratification and prognosis prediction. By identifying the genomic alterations of CRLMs, we aimed to develop a mutation-based gene-signature-based clinical score (mut-CS) system to improve clinical prognostication. Tumour tissues from 144 patients with CRLMs were analysed with next-generation sequencing (NGS). A mut-CS scoring system considering the unique mutation-based gene signature, primary site, and Fong-CRS was developed and could identify CRLM patients with poor prognosis. The mean time-dependent receiver operating characteristic curve AUC value of the mut-CS system was greater than that of previously established scoring measures (the Fong-CRS, the e-clinical score, the presence of concomitant RAS and TP53 mutations, and other clinical traits). Taking together, we identified a mutant signature that exhibits a strong prognostic effect for CRLMs. Traditional clinical scoring system characteristics were incorporated into the new mut-CS scoring system to help determine the appropriate treatment for CRLMs.

Topics & Concepts

Colorectal cancerReceiver operating characteristicOncologyMetastasisInternal medicineMedicineMutationScoring systemGeneBiologyBioinformaticsCancerGeneticsColorectal Cancer Treatments and StudiesGenetic factors in colorectal cancerHepatocellular Carcinoma Treatment and Prognosis