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Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom

Karina-Doris Vihta, Koen B. Pouwels, Tim Peto, Emma Pritchard, David W. Eyre, Thomas House, Owen Gethings, Ruth Studley, Emma Rourke, Duncan Cook, Ian Diamond, Derrick W. Crook, Philippa C. Matthews, Nicole Stoesser, A. Sarah Walker, COVID-19 Infection Survey, Emma Rourke, Ruth Studley, Tina Thomas, Daniel Ayoubkhani, Russell Black, Antonio Felton, Megan Crees, Joel W. Jones, Lina Lloyd, E. R. Sunderland, A. Sarah Walker, Derrick Crook, Philippa C. Matthews, Tim Peto, Emma Pritchard, Nicole Stoesser, Karina-Doris Vihta, Jia Wei, Alison Howarth, George Doherty, James Kavanagh, Kevin Chau, Sarah Cameron, Phoebe Tamblin-Hopper, Magda Wolna, Rachael Brown, Stephanie B. Hatch, Daniel Ebner, Lucas Martins Ferreira, Thomas Christott, Brian D. Marsden, Wanwisa Dejnirattisai, Juthathip Mongkolsapaya, Sarah Hoosdally, Richard J. Cornall, David I. Stuart, E. Yvonne Jones, Gavin Screaton, Koen B. Pouwels, David W. Eyre, Katrina Lythgoe, David Bonsall, Tanya Golubchik, Helen Fryer, John I. Bell, John Newton, Julie V. Robotham, Paul Birrell, Helena Jordan, Tim Sheppard, Graham Athey, Dan Moody, Leigh Curry, Pamela Brereton, Jodie Hay, Harper Van Steenhouse, Anna Godsmark, George Morris, Bobby Mallick, Phil Eeles, Stuart Cox, Kevin Paddon, Tim James, Sarah Cameron, Phoebe Tamblin-Hopper, Magda Wolna, Rachael Brown, Jessica Lee

2021Clinical Infectious Diseases59 citationsDOIOpen Access PDF

Abstract

BACKGROUND: "Classic" symptoms (cough, fever, loss of taste/smell) prompt severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) polymerase chain reaction (PCR) testing in the United Kingdom. Studies have assessed the ability of different symptoms to identify infection, but few have compared symptoms over time (reflecting variants) and by vaccination status. METHODS: Using the COVID-19 Infection Survey, sampling households across the United Kingdom, we compared symptoms in PCR-positives vs PCR-negatives, evaluating sensitivity of combinations of 12 symptoms (percentage symptomatic PCR-positives reporting specific symptoms) and tests per case (TPC) (PCR-positives or PCR-negatives reporting specific symptoms/ PCR-positives reporting specific symptoms). RESULTS: Between April 2020 and August 2021, 27 869 SARS-CoV-2 PCR-positive episodes occurred in 27 692 participants (median 42 years), of whom 13 427 (48%) self-reported symptoms ("symptomatic PCR-positives"). The comparator comprised 3 806 692 test-negative visits (457 215 participants); 130 612 (3%) self-reported symptoms ("symptomatic PCR-negatives"). Symptom reporting in PCR-positives varied by age, sex, and ethnicity, and over time, reflecting changes in prevalence of viral variants, incidental changes (eg, seasonal pathogens (with sore throat increasing in PCR-positives and PCR-negatives from April 2021), schools reopening) and vaccination rollout. After May 2021 when Delta emerged, headache and fever substantially increased in PCR-positives, but not PCR-negatives. Sensitivity of symptom-based detection increased from 74% using "classic" symptoms, to 81% adding fatigue/weakness, and 90% including all 8 additional symptoms. However, this increased TPC from 4.6 to 5.3 to 8.7. CONCLUSIONS: Expanded symptom combinations may provide modest benefits for sensitivity of PCR-based case detection, but this will vary between settings and over time, and increases tests/case. Large-scale changes to targeted PCR-testing approaches require careful evaluation given substantial resource and infrastructure implications.

Topics & Concepts

MedicineInternal medicineFalse positive paradoxSore throatReal-time polymerase chain reactionPopulationPediatricsImmunologyEnvironmental healthBiologyComputer scienceBiochemistryGeneMachine learningLong-Term Effects of COVID-19COVID-19 and Mental HealthRespiratory and Cough-Related Research
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