Litcius/Paper detail

Topological network analysis of patient similarity for precision management of acute blood pressure in spinal cord injury

Abel Torres-Espín, Jenny Haefeli, Reza Ehsanian, Dolores Torres, Carlos A Almeida, J Russell Huie, Austin Chou, Dmitriy Morozov, Nicole Sanderson, Benjamin Dirlikov, Catherine G Suen, Jessica L Nielson, Nikos Kyritsis, Debra D Hemmerle, Jason F Talbott, Geoffrey T Manley, Sanjay S Dhall, William D Whetstone, Jacqueline C Bresnahan, Michael S Beattie, Stephen L McKenna, Jonathan Z Pan, Adam R Ferguson, The TRACK-SCI Investigators

2021eLife40 citationsDOIOpen Access PDF

Abstract

Background: Predicting neurological recovery after spinal cord injury (SCI) is challenging. Using topological data analysis, we have previously shown that mean arterial pressure (MAP) during SCI surgery predicts long-term functional recovery in rodent models, motivating the present multicenter study in patients. Methods: Intra-operative monitoring records and neurological outcome data were extracted (n = 118 patients). We built a similarity network of patients from a low-dimensional space embedded using a non-linear algorithm, Isomap, and ensured topological extraction using persistent homology metrics. Confirmatory analysis was conducted through regression methods. Results: Network analysis suggested that time outside of an optimum MAP range (hypotension or hypertension) during surgery was associated with lower likelihood of neurological recovery at hospital discharge. Logistic and LASSO (least absolute shrinkage and selection operator) regression confirmed these findings, revealing an optimal MAP range of 76-[104-117] mmHg associated with neurological recovery. Conclusions: We show that deviation from this optimal MAP range during SCI surgery predicts lower probability of neurological recovery and suggest new targets for therapeutic intervention. Funding: NIH/NINDS: R01NS088475 (ARF); R01NS122888 (ARF); UH3NS106899 (ARF); Department of Veterans Affairs: 1I01RX002245 (ARF), I01RX002787 (ARF); Wings for Life Foundation (ATE, ARF); Craig H. Neilsen Foundation (ARF); and DOD: SC150198 (MSB); SC190233 (MSB).

Topics & Concepts

Spinal cord injurySimilarity (geometry)MedicineNetwork topologyTopology (electrical circuits)Foundation (evidence)Blood pressureSpinal cordArtificial intelligenceTopological data analysisNetwork analysisComputer scienceNetwork managementSpinal injuryArtificial neural networkData miningNeuroscienceBioinformaticsPattern recognition (psychology)Computational biologySpinal Cord Injury ResearchTraumatic Brain Injury and Neurovascular DisturbancesIntraoperative Neuromonitoring and Anesthetic Effects