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Structure, Function and Engineering of the Nonribosomal Peptide Synthetase Condensation Domain

Zhenkuai Huang, Zijing Peng, Mengli Zhang, Xinhai Li, Xiaoting Qiu

2024International Journal of Molecular Sciences13 citationsDOIOpen Access PDF

Abstract

The nonribosomal peptide synthetase (NRPS) is a highly precise molecular assembly machinery for synthesizing structurally diverse peptides, which have broad medicinal applications. Withinthe NRPS, the condensation (C) domain is a core catalytic domain responsible for the formation of amide bonds between individual monomer residues during peptide elongation. This review summarizes various aspects of the C domain, including its structural characteristics, catalytic mechanisms, substrate specificity, substrate gating function, and auxiliary functions. Moreover, through case analyses of the NRPS engineering targeting the C domains, the vast potential of the C domain in the combinatorial biosynthesis of peptide natural product derivatives is demonstrated.

Topics & Concepts

Nonribosomal peptideFunction (biology)PeptideChemistryCombinatorial chemistryDomain (mathematical analysis)Protein engineeringSubstrate (aquarium)MonomerStereochemistryBiosynthesisPeptide bondComputational biologyEnzymeBiochemistryBiologyOrganic chemistryCell biologyMathematical analysisMathematicsPolymerEcologyMicrobial Natural Products and BiosynthesisBiochemical and Structural CharacterizationChemical Synthesis and Analysis
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