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Crystal structure of the α1B-adrenergic receptor reveals molecular determinants of selective ligand recognition

Mattia Deluigi, Lena Morstein, Matthias Schuster, Christoph Klenk, Lisa Merklinger, Riley R. Cridge, Lazarus A. de Zhang, Alexander Klipp, Santiago Vacca, Tasneem M. Vaid, Peer R. E. Mittl, Pascal Egloff, Stefanie A. Eberle, Oliver Zerbe, David K. Chalmers, Daniel J. Scott, Andreas Plückthun

2022Nature Communications37 citationsDOIOpen Access PDF

Abstract

Abstract α-adrenergic receptors (αARs) are G protein-coupled receptors that regulate vital functions of the cardiovascular and nervous systems. The therapeutic potential of αARs, however, is largely unexploited and hampered by the scarcity of subtype-selective ligands. Moreover, several aminergic drugs either show off-target binding to αARs or fail to interact with the desired subtype. Here, we report the crystal structure of human α 1B AR bound to the inverse agonist (+)-cyclazosin, enabled by the fusion to a DARPin crystallization chaperone. The α 1B AR structure allows the identification of two unique secondary binding pockets. By structural comparison of α 1B AR with α 2 ARs, and by constructing α 1B AR-α 2C AR chimeras, we identify residues 3.29 and 6.55 as key determinants of ligand selectivity. Our findings provide a basis for discovery of α 1B AR-selective ligands and may guide the optimization of aminergic drugs to prevent off-target binding to αARs, or to elicit a selective interaction with the desired subtype.

Topics & Concepts

ReceptorLigand (biochemistry)AgonistChemistryInverse agonistComputational biologyBinding sitePlasma protein bindingG protein-coupled receptorIdentification (biology)Protein structureCrystal structureCell biologyBiophysicsAllosteric regulationBiochemistryHEK 293 cellsDrug discoveryMolecular recognitionStructure–activity relationshipFusion proteinStructural biologyNeuroscienceBiologyStereochemistryBioinformaticsReceptor Mechanisms and SignalingAdipose Tissue and MetabolismNicotinic Acetylcholine Receptors Study