The impact of AlphaFold2 on experimental structure solution
Maximilian Edich, David C. Briggs, Oliver Kippes, Yunyun Gao, Andrea Thorn
Abstract
protein design and the interpretation of Cryo-EM data with an atomic model. However, these methods are limited by their training data and are of limited use to predict conformational variability and fold flexibility; they also lack co-factors, post-translational modifications and multimeric complexes with oligonucleotides. They also are not always perfect in terms of chemical geometry. Nevertheless, machine learning-based fold prediction is a game changer for structural bioinformatics and experimentalists alike, with exciting developments ahead.
Topics & Concepts
Computer scienceFlexibility (engineering)Sequence (biology)Interpretation (philosophy)Protein structureTask (project management)OligonucleotideMachine learningArtificial intelligenceChemistryEngineeringSystems engineeringDNABiochemistryProgramming languageMathematicsStatisticsRNA and protein synthesis mechanismsEnzyme Structure and FunctionProtein Structure and Dynamics