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Phenotypic heterogeneity in human genetic diseases: ultrasensitivity-mediated threshold effects as a unifying molecular mechanism

Yi Sun, Yueh-Lin Wu, Ben‐Yang Liao

2023Journal of Biomedical Science30 citationsDOIOpen Access PDF

Abstract

Phenotypic heterogeneity is very common in genetic systems and in human diseases and has important consequences for disease diagnosis and treatment. In addition to the many genetic and non-genetic (e.g., epigenetic, environmental) factors reported to account for part of the heterogeneity, we stress the importance of stochastic fluctuation and regulatory network topology in contributing to phenotypic heterogeneity. We argue that a threshold effect is a unifying principle to explain the phenomenon; that ultrasensitivity is the molecular mechanism for this threshold effect; and discuss the three conditions for phenotypic heterogeneity to occur. We suggest that threshold effects occur not only at the cellular level, but also at the organ level. We stress the importance of context-dependence and its relationship to pleiotropy and edgetic mutations. Based on this model, we provide practical strategies to study human genetic diseases. By understanding the network mechanism for ultrasensitivity and identifying the critical factor, we may manipulate the weak spot to gently nudge the system from an ultrasensitive state to a stable non-disease state. Our analysis provides a new insight into the prevention and treatment of genetic diseases.

Topics & Concepts

PleiotropyMechanism (biology)BiologyEpigeneticsPhenotypeGenetic heterogeneityContext (archaeology)Gene regulatory networkGeneticsDiseaseComputational biologyEvolutionary biologyGeneGene expressionPhilosophyPaleontologyMedicineEpistemologyPathologyGene Regulatory Network AnalysisBioinformatics and Genomic NetworksMicrobial Metabolic Engineering and Bioproduction