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Synthetic Translational Regulation by Protein-Binding RNA Origami Scaffolds

Michael T. A. Nguyen, Georgios Pothoulakis, Ebbe Sloth Andersen

2022ACS Synthetic Biology18 citationsDOIOpen Access PDF

Abstract

. The aptamers are used as operators in transcription units that encode proteins fused to their cognate coat proteins, which leads to self-repression. RNA origami scaffolds that contain up to four aptamers serve as an alternate binder to activate translation. With this system, we demonstrate that the increase in expression of a reporter protein is dependent on both the concentration and number of aptamers on RNA origami scaffolds. We also demonstrate regulation of multiple proteins using a single MS2 coat protein fusion and apply this method to regulate the relative expression of enzymes of the branched pathway for deoxyviolacein biosynthesis.

Topics & Concepts

AptamerSynthetic biologyRNAFusion proteinComputational biologyTranslation (biology)BiologyTranslational regulationGene expressionGeneRNA interferenceReporter geneTranscription (linguistics)Protein biosynthesisCell biologyMessenger RNAMolecular biologyGeneticsRecombinant DNAPhilosophyLinguisticsRNA and protein synthesis mechanismsAdvanced biosensing and bioanalysis techniquesBacterial Genetics and Biotechnology