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Regulatory perturbations of ribosome allocation in bacteria reshape the growth proteome with a trade-off in adaptation capacity

David Hidalgo, César A. Martínez-Ortiz, Bernhard Ø. Palsson, José I. Jiménez, José Utrilla

2022iScience16 citationsDOIOpen Access PDF

Abstract

mutations), we show how they reshape the proteome for growth with a concomitant fitness cost. The fast-growing mutants shared downregulation of hedging functions and upregulated growth functions. They showed longer diauxic shifts and reduced activity of gluconeogenic promoters during glucose-acetate shifts, suggesting reduced availability of the RNA polymerase for expressing hedging proteome. These results show that the regulation of ribosomal allocation underlies the growth/hedging phenotypes obtained from laboratory evolution experiments.

Topics & Concepts

rpoBOperonBiologyRibosomal proteinRegulonRibosomal RNAMutantStringent responseProteomeDownregulation and upregulationPhenotypePromoterRibosomeRNAGeneticsBacteriaGene expressionGene16S ribosomal RNARNA and protein synthesis mechanismsBacterial Genetics and BiotechnologyEvolution and Genetic Dynamics