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Identification and Validation of a Novel Six-Gene Prognostic Signature of Stem Cell Characteristic in Colon Cancer

Yichao Liang, Qi Su, Xin Wu

2021Frontiers in Oncology47 citationsDOIOpen Access PDF

Abstract

Cancer stem cells play crucial roles in the development of colon cancer (COAD). This study tried to explore new markers for predicting the prognosis of colon cancer based on stem cell-related genes. In our study, 424 COAD samples from TCGA were divided into three subtypes based on 412 stem cell-related genes; there were significant differences in prognosis, clinical characteristics, and immune scores between these subtypes. 694 genes were screened between subgroups. Subsequently a six-gene signature (DYDC2, MS4A15, MAGEA1, WNT7A, APOD, and SERPINE1) was established. This model had strong robustness and stable predictive performance in cohorts of different platforms. Taken together, the six-gene signature constructed in this study could be used as a novel prognostic marker for COAD patients.

Topics & Concepts

Gene signatureColorectal cancerGeneStem cellCancer stem cellOncologyBiologyCancer researchCancerInternal medicineMedicineComputational biologyBioinformaticsGene expressionGeneticsRNA modifications and cancerFerroptosis and cancer prognosisGenetic factors in colorectal cancer