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A Closer Look at the Laboratory Impact of Utilizing ePlex Blood Culture Identification Panels: a Workflow Analysis Using Rapid Molecular Detection for Positive Blood Cultures

Giannoula S. Tansarli, Kimberle C. Chapin

2022Microbiology Spectrum16 citationsDOIOpen Access PDF

Abstract

Sepsis is a leading cause of morbidity and mortality worldwide. Rapid identification of the causative agent is of critical importance for the prompt initiation of the appropriate antibiotic treatment. In this study, we evaluated the diagnostic performance of the GenMark Dx ePlex blood culture identification (BCID) panels and their adoption into the clinical laboratory workflow. We prospectively tested 313 blood culture isolates and found that ePlex BCID panels had a positive percent agreement of 100% across all organisms tested after discordancy resolution. The negative percent agreement was 100% across all targets except Corynebacterium spp., where it was 99.7%. This new rapid technology (turnaround time of ~90 min) can help streamline laboratory efficiency in the blood bench workflow, reducing the time to result for identification of BSI pathogens. Adoption should be individualized based on the needs of the patient population and capabilities of the laboratory.

Topics & Concepts

WorkflowIdentification (biology)Blood cultureComputational biologyBiologyMicrobiologyComputer scienceEcologyDatabaseAntibioticsBacterial Identification and Susceptibility TestingDiphtheria, Corynebacterium, and TetanusClinical Laboratory Practices and Quality Control