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Atomic resolution dynamics of cohesive interactions in phase-separated Nup98 FG domains

Eszter E. Najbauer, Sheung Chun Ng, Christian Griesinger, Dirk Görlich, Loren B. Andreas

2022Nature Communications55 citationsDOIOpen Access PDF

Abstract

Cohesive FG domains assemble into a condensed phase forming the selective permeability barrier of nuclear pore complexes. Nanoscopic insight into fundamental cohesive interactions has long been hampered by the sequence heterogeneity of native FG domains. We overcome this challenge by utilizing an engineered perfectly repetitive sequence and a combination of solution and magic angle spinning NMR spectroscopy. We map the dynamics of cohesive interactions in both phase-separated and soluble states at atomic resolution using TROSY for rotational correlation time (TRACT) measurements. We find that FG repeats exhibit nanosecond-range rotational correlation times and remain disordered in both states, although FRAP measurements show slow translation of phase-separated FG domains. NOESY measurements enable the direct detection of contacts involved in cohesive interactions. Finally, increasing salt concentration and temperature enhance phase separation and decrease local mobility of FG repeats. This lower critical solution temperature (LCST) behaviour indicates that cohesive interactions are driven by entropy.

Topics & Concepts

Nanoscopic scaleChemical physicsMolecular dynamicsMaterials scienceTwo-dimensional nuclear magnetic resonance spectroscopyPhase (matter)Nuclear magnetic resonance spectroscopyMagic angle spinningSpectroscopySpinningNanosecondChemistryNuclear magnetic resonanceNanotechnologyPhysicsComputational chemistryLaserComposite materialQuantum mechanicsOrganic chemistryOpticsRNA Research and SplicingRNA modifications and cancerNuclear Structure and Function
Atomic resolution dynamics of cohesive interactions in phase-separated Nup98 FG domains | Litcius