Chromosome-level genome assembly of the Colorado potato beetle, Leptinotarsa decemlineata
Junjie Yan, Chaowei Zhang, Mengdi Zhang, Hang Zhou, Zhangqi Zuo, Xinhua Ding, Runzhi Zhang, Fei Li, Yulin Gao
Abstract
The Colorado potato beetle (Leptinotarsa decemlineata) is one of the most notorious insect pests of potatoes globally. Here, we generated a high-quality chromosome-level genome assembly of L. decemlineata using a combination of the PacBio HiFi sequencing and Hi-C scaffolding technologies. The genome assembly (-1,008 Mb) is anchored to 18 chromosomes (17 + XO), with a scaffold N50 of 58.32 Mb. It contains 676 Mb repeat sequences and 29,606 protein-coding genes. The chromosome-level genome assembly of L. decemlineata provides in-depth knowledge and will be a helpful resource for the beetle and invasive biology research communities.
Topics & Concepts
LeptinotarsaColorado potato beetleGenomeBiologySequence assemblyChromosomeGeneGeneticsBotanyLarvaTranscriptomeGene expressionInsect Resistance and GeneticsPlant Disease Resistance and GeneticsEntomopathogenic Microorganisms in Pest Control