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A Bioinspired Ni<sup>II</sup> Superoxide Dismutase Catalyst Designed on an ATCUN-like Binding Motif

Jérémy Domergue, Pawel Guinard, Magali Douillard, Jacques Pécaut, Olivier Proux, Colette Lebrun, Alan Le Goff, Pascale Maldivi, Pascale Delangle, Carole Duboc

2021Inorganic Chemistry14 citationsDOI

Abstract

Nickel superoxide dismutase (NiSOD) is an enzyme that protects cells against O2·–. While the structure of its active site is known, the mechanism of the catalytic cycle is still not elucidated. Its active site displays a square planar NiII center with two thiolates, the terminal amine and an amidate. We report here a bioinspired NiII complex built on an ATCUN-like binding motif modulated with one cysteine, which demonstrates catalytic SOD activity in water (kcat = 8.4(2) × 105 M–1 s–1 at pH = 8.1). Its reactivity with O2·– was also studied in acetonitrile allowing trapping two different short-lived species that were characterized by electron paramagnetic resonance or spectroelectrochemistry and a combination of density functional theory (DFT) and time-dependent DFT calculations. Based on these observations, we propose that O2·– interacts first with the complex outer sphere through a H-bond with the peptide scaffold in a [NiIIO2·–] species. This first species could then evolve into a NiIII hydroperoxo inner sphere species through a reaction driven by protonation that is thermodynamically highly favored according to DFT calculations.

Topics & Concepts

ChemistryProtonationCatalysisActive siteElectron paramagnetic resonanceSuperoxide dismutaseCatalytic cycleStereochemistryAmine gas treatingCrystallographyDensity functional theoryCoordination sphereNickelPhotochemistryEnzymeComputational chemistryCrystal structureNuclear magnetic resonanceIonOrganic chemistryPhysicsMetal-Catalyzed Oxygenation MechanismsElectrocatalysts for Energy ConversionMetal complexes synthesis and properties
A Bioinspired Ni<sup>II</sup> Superoxide Dismutase Catalyst Designed on an ATCUN-like Binding Motif | Litcius