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Unsupervised Machine Learning Neural Gas Algorithm for Accurate Evaluations of the Hessian Matrix in Molecular Dynamics

Michele Gandolfi, Michele Ceotto

2021Journal of Chemical Theory and Computation17 citationsDOIOpen Access PDF

Abstract

-acetyl-l-phenylalaninyl-l-methionine amide) at the level of DFT-B3LYP-D/6-31G* theory, from which the semiclassical vibrational power spectrum is calculated.

Topics & Concepts

Hessian matrixMolecular dynamicsSemiclassical physicsMatrix (chemical analysis)AlgorithmComputer scienceComputational chemistryPhysicsStatistical physicsMathematicsChemistryApplied mathematicsQuantum mechanicsQuantumChromatographyQuantum, superfluid, helium dynamicsAdvanced Chemical Physics StudiesProtein Structure and Dynamics
Unsupervised Machine Learning Neural Gas Algorithm for Accurate Evaluations of the Hessian Matrix in Molecular Dynamics | Litcius