Cardelino: computational integration of somatic clonal substructure and single-cell transcriptomes
Davis J. McCarthy, Raghd Rostom, Yuanhua Huang, Daniel J. Kunz, Petr Danecek, Marc Jan Bonder, Tzachi Hagai, Ruqian Lyu, Wenyi Wang, Daniel J. Gaffney, Benjamin D. Simons, Oliver Stegle, Sarah A. Teichmann
Topics & Concepts
Somatic cellBiologyclone (Java method)GeneticsGeneExomeTranscriptomeExome sequencingComputational biologySomatic evolution in cancerRNA-SeqIn silicoPhenotypeGene expressionSingle-cell and spatial transcriptomicsCancer Genomics and DiagnosticsCancer Cells and Metastasis