Effect of HIV/HAART and Other Clinical Variables on the Oral Mycobiome Using Multivariate Analyses
Paul L. Fidel, Zach A. Thompson, Elizabeth A. Lilly, Carolina Granada, Kelly Treas, Kenneth R. Dubois, Laura Beth Cook, Shahr B. Hashmi, Daniel J. Lisko, Chiranjit Mukherjee, José A. Vázquez, Michael E. Hagensee, Ann L. Griffen, Eugene J. Leys, Clifford J. Beall
Abstract
The oral microbiome is likely a key element of homeostasis in the oral cavity. With >600 bacterial species and >160 fungal species comprising the oral microbiome, influences on its composition can have an impact on both local and systemic health. We recently reported significant effects of HIV and several other clinical variables on the oral bacterial community in a large cohort of HIV-positive and -negative subjects. We describe here a comprehensive analysis of the oral mycobiome in the same cohort. Similar to the bacterial community, HIV under highly active antiretroviral therapy (HAART) had a significant impact on the mycobiome composition, but with less impact compared to other clinical variables. Additionally, unlike the oral bacterial microbiome, the oral mycobiome is often dominated by a single species with 4 major clusters of fungal communities. Together, these results suggest the oral mycobiome has distinct properties compared with the oral bacterial community, although both are equally impacted by HIV.