SPARK-X: non-parametric modeling enables scalable and robust detection of spatial expression patterns for large spatial transcriptomic studies
Jiaqiang Zhu, Shiquan Sun, Xiang Zhou
Abstract
Analysis code and preprocessed datasets for the paper.
Topics & Concepts
SPARK (programming language)Spatial analysisComputer scienceScalabilityParametric statisticsSpatial ecologyExpression (computer science)TranscriptomeData miningComputational biologyBiologyGene expressionRemote sensingGeographyMathematicsEcologyDatabaseBiochemistryStatisticsProgramming languageGeneSingle-cell and spatial transcriptomicsGene expression and cancer classificationMolecular Biology Techniques and Applications