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Identification and Validation of PKR as a Direct Target for the Novel Sulfonamide-Substituted Tetrahydroquinoline Nonselective Inhibitor of the NLRP3 Inflammasome

Fan Yang, Zhen Dai, Ming-yue Xue, Xiaoyi Chen, Juan Liu, Wang Li, Lili Xu, Bin Di

2024Journal of Medicinal Chemistry10 citationsDOIOpen Access PDF

Abstract

The NLRP3 inflammasome is a critical component of the innate immune system. The persistent abnormal activation of the NLRP3 inflammasome is implicated in numerous human diseases. Herein, sulfonamide-substituted tetrahydroquinoline derivative S-9 was identified as the most promising NLRP3 inhibitor, without obvious cytotoxicity. In vitro, S-9 inhibited the priming and activation stages of the NLRP3 inflammasome. Incidentally, we also observed that S-9 had inhibitory effects on the NLRC4 and AIM2 inflammasomes. To elucidate the multiple anti-inflammatory activities of S-9, photoaffinity probe P-2, which contained a photoaffinity label and a functional handle, was developed for target identification by chemical proteomics. We identified PKR as a novel target of S-9 in addition to NLRP3 by target fishing. Furthermore, S-9 exhibited a significant anti-neuroinflammatory effect in vivo . In summary, our findings show that S-9 is a promising lead compound targeting both PKR and NLRP3 that could emerge as a molecular tool for treating inflammasome-related diseases.

Topics & Concepts

SulfonamideInflammasomeChemistryInnate immune systemDerivative (finance)Identification (biology)Combinatorial chemistryBiochemistryStereochemistryReceptorBiologyFinancial economicsEconomicsBotanyInflammasome and immune disordersSphingolipid Metabolism and SignalingAdenosine and Purinergic Signaling