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S-adenosylmethionine synthases specify distinct H3K4me3 populations and gene expression patterns during heat stress

Adwait Anand Godbole, Sneha Gopalan, Thien-Kim Nguyen, Alexander Munden, Dominique S. Lui, Matthew J. Fanelli, Paula Vo, Caroline A. Lewis, Jessica B. Spinelli, Thomas G. Fazzio, Amy K. Walker

2023eLife15 citationsDOIOpen Access PDF

Abstract

Methylation is a widely occurring modification that requires the methyl donor S-adenosylmethionine (SAM) and acts in regulation of gene expression and other processes. SAM is synthesized from methionine, which is imported or generated through the 1-carbon cycle (1 CC). Alterations in 1 CC function have clear effects on lifespan and stress responses, but the wide distribution of this modification has made identification of specific mechanistic links difficult. Exploiting a dynamic stress-induced transcription model, we find that two SAM synthases in Caenorhabditis elegans , SAMS-1 and SAMS-4 , contribute differently to modification of H3K4me3, gene expression and survival. We find that sams-4 enhances H3K4me3 in heat shocked animals lacking sams-1 , however, sams-1 cannot compensate for sams-4 , which is required to survive heat stress. This suggests that the regulatory functions of SAM depend on its enzymatic source and that provisioning of SAM may be an important regulatory step linking 1 CC function to phenotypes in aging and stress.

Topics & Concepts

Gene expressionGeneticsBiologyHeat stressGeneH3K4me3EpigeneticsCell biologyRegulation of gene expressionExpression (computer science)Computational biologyPromoterComputer scienceAnimal scienceProgramming languageBiochemical and Molecular ResearchRNA modifications and cancerFolate and B Vitamins Research