Litcius/Paper detail

Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging

Ellen M. Quardokus, Diane C. Saunders, Elizabeth McDonough, John W. Hickey, Christopher Werlein, Christine Surrette, Presha Rajbhandari, Anna Martinez Casals, Hua Tian, Lisa Lowery, Elizabeth K. Neumann, Frida Björklund, Taruna V. Neelakantan, Joshua Croteau, Anne E. Wiblin, Jeremy Fisher, April J. Livengood, Karen Dowell, Jonathan C. Silverstein, Jeffrey M. Spraggins, Gloria Pryhuber, Gail Deutsch, Fiona Ginty, Garry P. Nolan, Simon Melov, Danny Jonigk, Michael A. Caldwell, Ioannis S. Vlachos, Werner Müller, Nils Gehlenborg, Brent R. Stockwell, Emma Lundberg, M Snyder, Ronald N. Germain, Jeannie M. Camarillo, Neil L. Kelleher, Katy Börner, Andrea J. Radtke

2023Nature Methods45 citationsDOIOpen Access PDF

Abstract

Multiplexed antibody-based imaging enables the detailed characterization of molecular and cellular organization in tissues. Advances in the field now allow high-parameter data collection (>60 targets); however, considerable expertise and capital are needed to construct the antibody panels employed by these methods. Organ mapping antibody panels are community-validated resources that save time and money, increase reproducibility, accelerate discovery and support the construction of a Human Reference Atlas.

Topics & Concepts

Computer scienceComputational biologyMultiplexingField (mathematics)Construct (python library)Data scienceBiologyMathematicsProgramming languageTelecommunicationsPure mathematicsSingle-cell and spatial transcriptomicsAdvanced Biosensing Techniques and ApplicationsCell Image Analysis Techniques