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Differential Long Noncoding RNA Profiling of BMI in Twins

Weilong Li, Jan Baumbach, Martin J. Larsen, Afsaneh Mohammadnejad, Jesper Lund, Kaare Christensen, Lene Christiansen, Qihua Tan

2020Epigenomics47 citationsDOIOpen Access PDF

Abstract

Aim: Many efforts have been deployed to identify genetic variants associated with BMI. Alternatively, we explore epigenetic contribution to BMI variation by focusing on long noncoding RNAs (lncRNAs) which represents a key layer of epigenetic control. Materials & methods: We analyzed lncRNA expression in whole blood of 229 monozygotic twin pairs in association with BMI using generalized estimating equations. Results & conclusion: Six lncRNA probes were identified as significant (false discovery rate <0.05), with BMI showing causal effects on the expression of the significant lncRNAs. Functional annotation of differential profiles identified Gene ontology biological processes including kidney development, regulations of lipid biosynthetic process, circadian rhythm, notch signaling, etc. Whole blood lncRNAs are significantly expressed in response to BMI variation.

Topics & Concepts

BiologyEpigeneticsGene ontologyMonozygotic twinComputational biologyFalse discovery rateGeneticsGene expression profilingBioinformaticsGeneGene expressionCancer-related molecular mechanisms researchRNA modifications and cancerEpigenetics and DNA Methylation