BepiTBR: T-B reciprocity enhances B cell epitope prediction
James Zhu, Anagha Gouru, Fangjiang Wu, Jay A. Berzofsky, Yang Xie, Tao Wang
Abstract
T cell epitopes (predicted HLA class II epitopes) in the model leads to significant enhancement in the prediction of linear B cell epitopes. Curiously, the positive impact on B cell epitope generation is specific to the enrichment of DQ allele binders. Overall, our work provides interesting mechanistic insights into the generation of B cell epitopes and points to a new avenue to improve B cell epitope prediction for the field.
Topics & Concepts
Reciprocity (cultural anthropology)EpitopeComputational biologyChemistryBiologyImmunologyAntibodyPsychologySocial psychologyvaccines and immunoinformatics approachesImmunotherapy and Immune ResponsesMicrobial infections and disease research