TurboGNN: Improving the End-to-End Performance for Sampling-Based GNN Training on GPUs
Wenchao Wu, Xuanhua Shi, Ligang He, Hai Jin
Abstract
<italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">Graph Neural Networks</i> (GNN) have evolved as powerful models for graph representation learning. Sampling-based training methods have been introduced to train large graphs without compromising accuracy. However, it is challenging for the existing GNN systems to effectively utilize multi-core accelerators, especially GPUs, due to a large number of atomic operations and unbalanced workload originating from the serial execution of multiple GNN processing stages. In this paper, we propose a combination of optimization techniques to accelerate the end-to-end performance of the sampling-based GNN training process. Specifically, we propose an adaptive share memory-based sampling technique and a degree-guided thread block scheduling strategy to optimize the graph sampling. Further, based on the observations of resource demand in different training stages, we propose an asynchronous pipeline-based scheduling method, which accelerates the GNN training by decoupling different training stages into a pipeline and therefore improves the GPU resource utilization significantly. The experimental results show that compared with the existing work, the proposed methods can achieve up to 5.6X performance speedup in the end-to-end performance.