Dynamical Systems Model of RNA Velocity Improves Inference of Single-cell Trajectory, Pseudo-time and Gene Regulation
Ruishan Liu, Angela Oliveira Pisco, Emelie Braun, Sten Linnarsson, James Zou
Topics & Concepts
OdeSnapshot (computer storage)RNAOrdinary differential equationInferenceGene regulatory networkTrajectoryComputer scienceExpression (computer science)Computational biologyGene expressionGeneBiologyMathematicsGeneticsDifferential equationPhysicsArtificial intelligenceApplied mathematicsOperating systemMathematical analysisAstronomyProgramming languageSingle-cell and spatial transcriptomicsGene Regulatory Network AnalysisRNA Research and Splicing