Litcius/Paper detail

Probing the mechanism of interaction between capsaicin and myofibrillar proteins through multispectral, molecular docking, and molecular dynamics simulation methods

Zhicheng Wu, Jingbing Xu, Jinggang Ruan, Jiaxin Chen, Xue Li, Yiru Yu, Xinrui Xie, Jie Tang, Dong Zhang, Hongjun Li

2023Food Chemistry X57 citationsDOIOpen Access PDF

Abstract

The interaction between myofibrillar proteins (MPs) and capsaicin (CAP) was investigated using multispectral, molecular docking, and molecular dynamics simulation methods. The resulting complex increased the hydrophobicity of the tryptophan and tyrosine microenvironment as revealed by fluorescence spectral analysis. The fluorescence burst mechanism study indicated that the fluorescence burst of CAP on the MPs was a static one (Kq = 1.386 × 1012 m–1s−1) and that CAP could bind with MPs well (Ka = 3.31 × 104 L/mol, n = 1.09). The analysis of circular dichroism demonstrated that the interaction between CAP and MPs caused a decrease in the α-helical structure of MPs. The complexes formed exhibited lower particle size and higher absolute ζ potential. Furthermore, hydrogen bonding, van der Waals forces, and hydrophobic interactions were found to be the primary factors facilitating the interaction between CAP and MPs, as suggested by molecular docking models and molecular dynamics simulations.

Topics & Concepts

Molecular dynamicsChemistryvan der Waals forceDocking (animal)Circular dichroismBiophysicsHydrogen bondHydrophobic effectFluorescenceMolecular modelTryptophanCrystallographyStereochemistryComputational chemistryMoleculeBiochemistryAmino acidBiologyOrganic chemistryMedicinePhysicsQuantum mechanicsNursingMeat and Animal Product QualityProtein Interaction Studies and Fluorescence AnalysisAnimal Nutrition and Physiology