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Amide Proton Transfer Imaging in Predicting Isocitrate Dehydrogenase 1 Mutation Status of Grade II/III Gliomas Based on Support Vector Machine

Yu Han, Wen Wang, Yang Yang, Ying‐Zhi Sun, Gang Xiao, Qiang Tian, Jin Zhang, Guangbin Cui, Lin‐Feng Yan

2020Frontiers in Neuroscience31 citationsDOIOpen Access PDF

Abstract

Background: To compare the efficacies of univariate and radiomics analyses of amide proton transfer weighted (APTW) imaging in predicting isocitrate dehydrogenase 1 (IDH1) mutation of grade II/III gliomas. Methods: Fifty-nine grade II/III glioma patients with known IDH1 mutation status were prospectively included (IDH1 wild type, 16; IDH1 mutation, 43). A total of 1044 quantitative radiomics features were extracted from APTW images. The efficacies of univariate and radiomics analyses in predicting IDH1 mutation were compared. Feature values were compared between two groups with independent t test and receiver operating characteristic (ROC) analysis was applied to evaluate the predicting efficacy of each feature. Cases were randomly assigned to either the training (n=49) or test cohort (n=10) for the radiomics analysis. Support vector machine with recursive feature elimination (SVM-RFE) was adopted to select the optimal feature subset. The adverse impact of the imbalance dataset in the training cohort was solved by synthetic minority oversampling technique (SMOTE). Subsequently, the performance of SVM model was assessed on both training and test cohort. Results: As for univariate analysis, 18 features were significantly different between IDH1 wild-type and mutant groups (P < 0.05). Among these parameters, High Grey Level Run Emphasis All Direction offset 8 SD achieved the biggest area under the curve (AUC) (0.769) with the accuracy of 0.799. As for radiomics analysis, SVM model was established using 19 features selected with SVM-RFE. The AUC and accuracy for IDH1 mutation on training set were 0.892 and 0.952, while on the testing set were 0.7 and 0.84, respectively. Conclusion: Radiomics strategy based on APT image features is potentially useful for preoperative estimating IDH1 mutation status.

Topics & Concepts

Isocitrate dehydrogenaseUnivariateSupport vector machineReceiver operating characteristicUnivariate analysisIDH1Artificial intelligenceGliomaFeature selectionComputer scienceMutationPattern recognition (psychology)MedicineMachine learningMultivariate analysisBiologyCancer researchMultivariate statisticsGeneticsGeneBiochemistryEnzymeRadiomics and Machine Learning in Medical ImagingGlioma Diagnosis and TreatmentMedical Imaging Techniques and Applications