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Single‐cell RNA sequencing to explore cancer‐associated fibroblasts heterogeneity: “Single” vision for “heterogeneous” environment

Xiangjian Zhang, Ruiqiu Zhu, Die Yu, Juan Wang, Yuxiang Yan, Ke Xu

2023Cell Proliferation28 citationsDOIOpen Access PDF

Abstract

Cancer-associated fibroblasts (CAFs), a phenotypically and functionally heterogeneous stromal cell, are one of the most important components of the tumour microenvironment. Previous studies have consolidated it as a promising target against cancer. However, variable therapeutic efficacy-both protumor and antitumor effects have been observed not least owing to the strong heterogeneity of CAFs. Over the past 10 years, advances in single-cell RNA sequencing (scRNA-seq) technologies had a dramatic effect on biomedical research, enabling the analysis of single cell transcriptomes with unprecedented resolution and throughput. Specifically, scRNA-seq facilitates our understanding of the complexity and heterogeneity of diverse CAF subtypes. In this review, we discuss the up-to-date knowledge about CAF heterogeneity with a focus on scRNA-seq perspective to investigate the emerging strategies for integrating multimodal single-cell platforms. Furthermore, we summarized the clinical application of scRNA-seq on CAF research. We believe that the comprehensive understanding of the heterogeneity of CAFs form different visions will generate innovative solutions to cancer therapy and achieve clinical applications.

Topics & Concepts

Cancer-Associated FibroblastsComputational biologyTranscriptomeBiologyStromal cellTumor heterogeneityTumour heterogeneityTumor microenvironmentCellCancerCancer cellGenetic heterogeneitySingle cell sequencingBioinformaticsCancer researchPhenotypeGeneticsGeneGene expressionExome sequencingSingle-cell and spatial transcriptomicsCancer Cells and MetastasisCancer Genomics and Diagnostics