Litcius/Paper detail

Various Sorts of Chalcogen Bonds Formed by an Aromatic System

Steve Scheiner

2022The Journal of Physical Chemistry A17 citationsDOI

Abstract

(Y = S, Se, Te) can engage in a number of different interactions with another such unit within the homodimer. Quantum calculations show that the two rings can be oriented perpendicular to one another in a T-shaped dimer in which the Y atom accepts electron density from the π-system of the other unit in a Y···π chalcogen bond (ChB). This geometry best takes advantage of attractions between the electrostatic potentials surrounding the two monomers. There are two other geometries in which the two Y atoms engage in a ChB with one another. However, instead of a simple interaction between a σ-hole on one Y and the lone pair of its neighbor, the interaction is better described as a pair of symmetrically equivalent Y···Y interactions, in which charge is transferred in both directions simultaneously, thereby effectively doubling the strength of the bond. These geometries differ from what might be expected based simply on the juxtaposition of the electrostatic potentials of the two monomers.

Topics & Concepts

ChalcogenLone pairRing (chemistry)DimerAtom (system on chip)ChemistryCrystallographyUnit (ring theory)MonomerThiophenePerpendicularComputational chemistryMoleculePolymerGeometryMathematicsComputer scienceMathematics educationEmbedded systemOrganic chemistryCrystallography and molecular interactionsOrganic Chemistry Cycloaddition ReactionsAdvanced Chemical Physics Studies