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Analytical and Computational Advances, Opportunities, and Challenges in Marine Organic Biogeochemistry in an Era of “Omics”

Andrew D. Steen, Stephanie Kusch, Hussain Abdulla, Nevenka Cakić, Sarah Coffinet, Thorsten Dittmar, J. M. Fulton, Valier Galy, Kai‐Uwe Hinrichs, Anitra E. Ingalls, Boris Koch, Elizabeth B. Kujawinski, Zhanfei Liu, Helena Osterholz, Darci Rush, Michael Seidel, Julio Sepúlveda, Stuart G. Wakeham

2020Frontiers in Marine Science54 citationsDOIOpen Access PDF

Abstract

Advances in sampling tools, analytical methods, and data handling capabilities have been fundamental to the growth of marine organic biogeochemistry over the past four decades. There has always been a strong feedback between analytical advances and scientific advances. However, whereas advances in analytical technology were often the driving force that made possible progress in elucidating the sources and fate of organic matter in the ocean in the first decades of marine organic biogeochemistry, today process-based scientific questions should drive analytical developments. Several paradigm shifts and challenges for the future are related to the intersection between analytical progress and scientific evolution. Untargeted "molecular headhunting" for its own sake is now being subsumed into process-driven targeted investigations that ask new questions and thus require new analytical capabilities. However, there are still major gaps in characterizing the chemical composition and biochemical behavior of macromolecules, as well as in generating reference standards for relevant types of organic matter. Field-based measurements are now routinely complemented by controlled laboratory experiments and in situ rate measurements of key biogeochemical processes. And finally, the multidisciplinary investigations that are becoming more common generate large and diverse datasets, requiring innovative computational tools

Topics & Concepts

BiogeochemistryOmicsOceanographyData scienceEnvironmental scienceBiochemical engineeringComputational biologyBiologyComputer scienceBioinformaticsEngineeringGeologyMetabolomics and Mass Spectrometry StudiesMarine and coastal ecosystemsAtmospheric and Environmental Gas Dynamics
Analytical and Computational Advances, Opportunities, and Challenges in Marine Organic Biogeochemistry in an Era of “Omics” | Litcius