Litcius/Paper detail

Unraveling virus relationships by structure-based phylogenetic classification

Weng M. Ng, Alice J. Stelfox, Thomas A. Bowden

2020Virus Evolution29 citationsDOIOpen Access PDF

Abstract

Delineation of the intricacies of protein function from macromolecular structure constitutes a continual obstacle in the study of cell and pathogen biology. Structure-based phylogenetic analysis has emerged as a powerful tool for addressing this challenge, allowing the detection and quantification of conserved architectural properties between proteins, including those with low or no detectable sequence homology. With a focus on viral protein structure, we highlight how a number of investigations have utilized this powerful method to infer common functionality and ancestry.

Topics & Concepts

Phylogenetic treeComputational biologyBiologyHomology (biology)Sequence homologyPhylogeneticsEvolutionary biologySequence alignmentFunction (biology)Peptide sequenceGeneticsGeneBacteriophages and microbial interactionsVirology and Viral DiseasesPlant Virus Research Studies