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UPP1 promotes lung adenocarcinoma progression through the induction of an immunosuppressive microenvironment

Yin Li, Manling Jiang, Ling Aye, Li Luo, Yong Zhang, Fengkai Xu, Yongqi Wei, Dan Peng, Xiang He, Jie Gu, Xiaofang Yu, Guoping Li, Di Ge, Chunlai Lu

2024Nature Communications53 citationsDOIOpen Access PDF

Abstract

Abstract The complexity of the tumor microenvironment (TME) is a crucial factor in lung adenocarcinoma (LUAD) progression. To gain deeper insights into molecular mechanisms of LUAD, we perform an integrative single-cell RNA sequencing (scRNA-seq) data analysis of 377,574 cells from 117 LUAD patient samples. By linking scRNA-seq data with bulk gene expression data, we identify a cluster of prognostic-related UPP1 high tumor cells. These cells, primarily situated at the invasive front of tumors, display a stronger association with the immunosuppressive components in the TME. Our cytokine array analysis reveals that the upregulation of UPP1 in tumor cells leads to the increased release of various immunosuppressive cytokines, with TGF-β1 being particularly prominent. Furthermore, this UPP1 upregulation also elevates the expression of PD-L1 through the PI3K/AKT/mTOR pathway, which contributes to the suppression of CD8 + T cells. Cytometry by time-of-flight (CyTOF) analysis provides additional evidence of the role of UPP1 in shaping the immunosuppressive nature of the TME. Using patient-derived organoids (PDOs), we discover that UPP1 high tumors exhibit relatively increased sensitivity to Bosutinib and Dasatinib. Collectively, our study highlights the immunosuppressive role of UPP1 in LUAD, and these findings may provide insights into the molecular features of LUAD and facilitate the development of personalized treatment strategies.

Topics & Concepts

Tumor microenvironmentCancer researchDownregulation and upregulationDasatinibPI3K/AKT/mTOR pathwayAdenocarcinomaBiologyProtein kinase BCytokineImmunologySignal transductionCancerCell biologyGeneTumor cellsGeneticsImatinibMyeloid leukemiaSingle-cell and spatial transcriptomicsCancer Genomics and DiagnosticsRNA modifications and cancer
UPP1 promotes lung adenocarcinoma progression through the induction of an immunosuppressive microenvironment | Litcius